Blog

What’s happening at Kalman-Labs.

Stay informed with research updates, company news, and insights on how we are working on new innovative ideas.

Featured

gnn_pipeline
Sunday, October 6, 2024
Graph Neural Networks (GNNs) have emerged as a powerful machine learning framework that extends the capabilities of traditional neural networks to operate on graph-structured data. By leveraging the connectivity and relational information within graphs, GNNs have found applications in a wide range of domains, including social networks, biological data analysis, recommendation systems, and drug discovery.
Rishi Upadhyay
gene-editing
Tuesday, September 24, 2024
Imagine a world where genetic diseases like cystic fibrosis, HIV, or even certain cancers could be cured by editing the very DNA that causes them. Welcome to the fascinating realm of gene editing — a groundbreaking frontier in modern science that’s reshaping our understanding of life itself. In this blog, we explore the powerful gene-editing tools CRISPR-Cas9, TALENs, and Zinc Finger Nucleases (ZFNs), each offering remarkable precision to rewrite the genetic code.
Mihir Sen
llm banner
Tuesday, September 24, 2024
Artificial Intelligence (AI) has rapidly evolved in recent years, particularly in natural language processing (NLP). AI systems like GPT-3 are now capable of generating text that is coherent, contextually accurate, and, in many ways, indistinguishable from human writing. However, these systems are generalized. They process language based on large datasets but do not consider individual differences in how users think, process, or interpret information.
Om Dabral
Sunday, October 6, 2024
Aditya Raj

Revolutionizing Machine Learning with a Decentralized Federated Learning Platform

In today’s digital landscape, the need for privacy-preserving, scalable, and decentralized machine learning solutions is more critical than ever. With vast amounts of data distributed across different sources, centralized AI models face challenges related to privacy, data security, and the cost of data transfer. The advent of decentralized federated learning offers a cutting-edge solution to these problems.

Sunday, October 6, 2024
Rishi Upadhyay

Understanding Drug Synergy and Its Role in Predicting Effective Therapies

Drug synergy is a concept that has revolutionized the way we approach combination therapies in modern medicine. By combining two or more drugs, researchers aim to enhance the overall therapeutic outcome in ways that surpass what each drug can achieve individually. In this blog, we will dive into the fundamentals of drug synergy, explore the metrics used to quantify drug interactions, and examine several models used in drug synergy prediction, including Loewe Additivity, Bliss Independence, and the ZIP model.

Sunday, October 6, 2024
Mihir Sen

sgRNA-DNA sequence encoding: Paper Analysis and Research Scope

The CRISPR-Cas9 gene editing technique has revolutionized biotechnology by enabling precise DNA modifications. However, one of its significant challenges is off-target effects, which occur when the Cas9 enzyme unintentionally edits similar but unintended locations in the genome. These off-target mutations can have detrimental consequences, especially in therapeutic applications. To address this problem, the research paper presents a novel deep learning-based approach to improve off-target prediction accuracy in CRISPR-Cas9, focusing on the interaction between sgRNA (single guide RNA) sequences and DNA.

Sunday, October 6, 2024
Aditya Raj

Apindel: Detailed Literature Review and Research Scope

The paper titled “Predicting CRISPR/Cas9 Repair Outcomes by Attention-Based Deep Learning Framework” introduces the Apindel model, a deep learning architecture designed to predict DNA repair outcomes post-CRISPR/Cas9 gene editing. This literature review delves into the methodologies, dataset details, and potential improvements.

Sunday, October 6, 2024
Kalman Labs

Introduction to Graph Theory and Graph Neural Networks (GNNs)

Graphs are powerful tools for representing and analysing complex relationships in data. By converting real-world data into graphs, we can uncover patterns and insights that are often hidden in raw datasets. In this blog, we’ll explore the basics of graph theory, its applications in various domains, the common formats and datasets used in graph analysis, and how graphs are utilized in machine learning, particularly with Graph Neural Networks (GNNs).

Next